Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 CASP2-203ENST00000392925 616 ntTSL 3 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 AL080243.1-201ENST00000423293 1060 ntBASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 CDCA4P4-201ENST00000435216 680 ntBASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 AC053503.3-201ENST00000448375 114 ntBASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 GPX3-202ENST00000517973 612 ntTSL 3 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 KRT18P37-201ENST00000520711 1282 ntBASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 KRT8P2-201ENST00000556193 944 ntBASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 LINC02447-202ENST00000501888 2146 ntBASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 AC008536.3-201ENST00000623282 1599 ntBASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TMEM88BA6NKF7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 SNORA57-201ENST00000383870 149 ntBASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 RN7SL147P-201ENST00000487345 298 ntBASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 RN7SL375P-201ENST00000492442 298 ntBASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 AL133467.4-201ENST00000602953 725 ntBASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TMEM88BA6NKF7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.96■□□□□ 0.3
TMEM88BA6NKF7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.96■□□□□ 0.3
TMEM88BA6NKF7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.96■□□□□ 0.3
TMEM88BA6NKF7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.96■□□□□ 0.3
TMEM88BA6NKF7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
TMEM88BA6NKF7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEM88BA6NKF7 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TMEM88BA6NKF7 AC092127.1-201ENST00000567093 3455 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 AL121949.3-201ENST00000406684 385 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 AC098657.1-201ENST00000416270 1135 ntBASIC16.95■□□□□ 0.3
TMEM88BA6NKF7 PGAM1P11-201ENST00000416729 680 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms