Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 BRWD1P1-201ENST00000401091 371 ntBASIC15.27■□□□□ 0.04
CAPN8A6NHC0 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.27■□□□□ 0.04
CAPN8A6NHC0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 BTNL10-201ENST00000595971 695 ntBASIC15.27■□□□□ 0.04
CAPN8A6NHC0 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CAPN8A6NHC0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.27■□□□□ 0.03
CAPN8A6NHC0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 ZBED1P1-201ENST00000502364 1930 ntBASIC15.27■□□□□ 0.03
CAPN8A6NHC0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CAPN8A6NHC0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 AC022616.1-201ENST00000518688 554 ntBASIC15.26■□□□□ 0.03
CAPN8A6NHC0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 AL022328.1-201ENST00000610050 478 ntBASIC15.26■□□□□ 0.03
CAPN8A6NHC0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.26■□□□□ 0.03
CAPN8A6NHC0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 AL603764.1-201ENST00000636452 321 ntBASIC15.26■□□□□ 0.03
CAPN8A6NHC0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CAPN8A6NHC0 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms