Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 AL645937.2-201ENST00000396808 931 ntBASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 ACTG1P3-201ENST00000431775 1114 ntBASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PRAMEF25A6NGN4 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AC092135.3-201ENST00000624151 1846 ntBASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 KRT18P25-201ENST00000508931 1278 ntBASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AC068587.3-201ENST00000526613 355 ntBASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AP005019.2-201ENST00000615104 511 ntBASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AC063926.2-201ENST00000623766 1308 ntBASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AL158070.2-201ENST00000623713 1621 ntBASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 MIR600HG-201ENST00000449175 5984 ntBASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 AL137783.1-201ENST00000623494 1896 ntBASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PRAMEF25A6NGN4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
PRAMEF25A6NGN4 PCDHA3-202ENST00000532566 4594 ntBASIC14.03□□□□□ -0.16
PRAMEF25A6NGN4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF25A6NGN4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.03□□□□□ -0.16
PRAMEF25A6NGN4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF25A6NGN4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF25A6NGN4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF25A6NGN4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
PRAMEF25A6NGN4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
PRAMEF25A6NGN4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms