Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PPARGC1AQ9UBK2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 AC092933.1-201ENST00000393644 945 ntBASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 LRRC59-203ENST00000576448 1531 ntBASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.67■□□□□ 0.1
PPARGC1AQ9UBK2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 EIF3FP3-201ENST00000434851 1086 ntBASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AC106760.1-201ENST00000508690 800 ntBASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.66■□□□□ 0.1
PPARGC1AQ9UBK2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms