Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC027601.5-201ENST00000624065 2482 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AC136759.1-202ENST00000530858 2194 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AC131212.3-201ENST00000624087 4219 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 LINC01230-201ENST00000625222 3017 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 AC015802.1-201ENST00000588104 1449 ntBASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LIN7CQ9NUP9 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.52□□□□□ -0.4
LIN7CQ9NUP9 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 AC055811.4-201ENST00000624039 1754 ntBASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 KRT18P64-201ENST00000434946 1219 ntBASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 UGT1A2P-201ENST00000454886 866 ntBASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 AC104794.3-201ENST00000566840 1248 ntBASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 SAMD11P1-201ENST00000571429 661 ntBASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 SRD5A3P1-201ENST00000603021 949 ntBASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 MIR193BHG-211ENST00000641433 5365 ntBASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LIN7CQ9NUP9 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LIN7CQ9NUP9 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms