Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD248Q9HCU0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD248Q9HCU0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD248Q9HCU0 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CD248Q9HCU0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.87■□□□□ 0.13
CD248Q9HCU0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.86■□□□□ 0.13
CD248Q9HCU0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 MIR1908-201ENST00000410394 80 ntBASIC15.86■□□□□ 0.13
CD248Q9HCU0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 BCRP2-202ENST00000447763 634 ntBASIC15.86■□□□□ 0.13
CD248Q9HCU0 KLF2P4-201ENST00000451959 1225 ntBASIC15.86■□□□□ 0.13
CD248Q9HCU0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 RPL13AP25-201ENST00000484130 612 ntBASIC15.86■□□□□ 0.13
CD248Q9HCU0 BCRP6-201ENST00000510112 632 ntBASIC15.86■□□□□ 0.13
CD248Q9HCU0 BCRP7-201ENST00000511549 544 ntBASIC15.86■□□□□ 0.13
CD248Q9HCU0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CD248Q9HCU0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CD248Q9HCU0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 AL121723.1-201ENST00000445194 1519 ntBASIC15.85■□□□□ 0.13
CD248Q9HCU0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CD248Q9HCU0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.85■□□□□ 0.13
CD248Q9HCU0 C1QBPP1-201ENST00000400117 770 ntBASIC15.85■□□□□ 0.13
CD248Q9HCU0 RPL7P3-201ENST00000441388 714 ntBASIC15.85■□□□□ 0.13
CD248Q9HCU0 FO681548.1-201ENST00000455617 1132 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms