Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CICP14-201ENST00000629111 2732 ntBASIC17.62■□□□□ 0.41
RNF41Q9H4P4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 AC079178.1-201ENST00000420915 656 ntBASIC17.62■□□□□ 0.41
RNF41Q9H4P4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 MIR4683-201ENST00000579659 81 ntBASIC17.62■□□□□ 0.41
RNF41Q9H4P4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 MRPL37P1-201ENST00000592451 1337 ntBASIC17.62■□□□□ 0.41
RNF41Q9H4P4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF41Q9H4P4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 AC092135.3-201ENST00000624151 1846 ntBASIC17.61■□□□□ 0.41
RNF41Q9H4P4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 MIR4741-201ENST00000579822 90 ntBASIC17.61■□□□□ 0.41
RNF41Q9H4P4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 AC008825.2-201ENST00000603374 718 ntBASIC17.61■□□□□ 0.41
RNF41Q9H4P4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 TUBB1P2-201ENST00000422712 1306 ntBASIC17.61■□□□□ 0.41
RNF41Q9H4P4 TUBB1P1-201ENST00000503144 1300 ntBASIC17.61■□□□□ 0.41
RNF41Q9H4P4 AL136172.1-201ENST00000598590 1394 ntBASIC17.61■□□□□ 0.41
RNF41Q9H4P4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 AL023775.1-201ENST00000454907 1746 ntBASIC17.61■□□□□ 0.41
RNF41Q9H4P4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF41Q9H4P4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 AC023824.1-201ENST00000562945 2975 ntBASIC17.6■□□□□ 0.41
RNF41Q9H4P4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 HIST2H2BB-201ENST00000449108 381 ntBASIC17.6■□□□□ 0.41
RNF41Q9H4P4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 AL358472.3-201ENST00000608147 415 ntBASIC17.6■□□□□ 0.41
RNF41Q9H4P4 AC244157.2-201ENST00000616239 1006 ntBASIC17.6■□□□□ 0.41
RNF41Q9H4P4 AC009542.2-202ENST00000619004 1067 ntBASIC17.6■□□□□ 0.41
RNF41Q9H4P4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 AL161772.1-201ENST00000610494 4412 ntBASIC17.6■□□□□ 0.41
RNF41Q9H4P4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF41Q9H4P4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF41Q9H4P4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms