Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
POLR2J3Q9H1A7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 MIR943-201ENST00000401286 94 ntBASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 RRP7BP-205ENST00000566851 833 ntBASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 AL138799.1-201ENST00000448213 1675 ntBASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.91□□□□□ -0.18
POLR2J3Q9H1A7 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AL158070.2-201ENST00000623713 1621 ntBASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 MEP1AP4-201ENST00000423244 1087 ntBASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 HLA-K-203ENST00000430151 1046 ntBASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 FAM86LP-201ENST00000478302 853 ntBASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 IGHV3-42-201ENST00000520410 361 ntBASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.9□□□□□ -0.18
POLR2J3Q9H1A7 AC009407.1-201ENST00000568958 598 ntBASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms