Protein–RNA interactions for Protein: Q9C0C4

SEMA4C, Semaphorin-4C, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4CQ9C0C4 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEMA4CQ9C0C4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.29□□□□□ -0.12
SEMA4CQ9C0C4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.29□□□□□ -0.12
SEMA4CQ9C0C4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SEMA4CQ9C0C4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 AC008132.1-202ENST00000342005 1389 ntBASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 CNN2P10-201ENST00000443067 918 ntBASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 AL023775.1-201ENST00000454907 1746 ntBASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 SERPINA13P-202ENST00000478994 924 ntBASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 ECM1P1-201ENST00000604092 1279 ntBASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 AC104581.4-201ENST00000623126 3052 ntBASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SEMA4CQ9C0C4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 AC112693.3-201ENST00000624819 1983 ntBASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 TUBBP5-203ENST00000508529 1334 ntBASIC14.27□□□□□ -0.12
SEMA4CQ9C0C4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 RN7SL736P-201ENST00000613111 269 ntBASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SEMA4CQ9C0C4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms