Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
BBS4Q96RK4 AL162726.2-201ENST00000438986 1017 ntBASIC14.27□□□□□ -0.13
BBS4Q96RK4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.27□□□□□ -0.13
BBS4Q96RK4 AC190387.1-201ENST00000551683 408 ntBASIC14.27□□□□□ -0.13
BBS4Q96RK4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 CTBP2P3-201ENST00000585629 1255 ntBASIC14.27□□□□□ -0.13
BBS4Q96RK4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.27□□□□□ -0.13
BBS4Q96RK4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.27□□□□□ -0.13
BBS4Q96RK4 CU634019.7-201ENST00000624153 1185 ntBASIC14.27□□□□□ -0.13
BBS4Q96RK4 FP236241.2-201ENST00000624906 1185 ntBASIC14.27□□□□□ -0.13
BBS4Q96RK4 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.27□□□□□ -0.13
BBS4Q96RK4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.27□□□□□ -0.13
BBS4Q96RK4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BBS4Q96RK4 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 AC018665.1-201ENST00000622927 1362 ntBASIC14.26□□□□□ -0.13
BBS4Q96RK4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 KLF2P2-201ENST00000416807 1039 ntBASIC14.26□□□□□ -0.13
BBS4Q96RK4 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 KRT18P25-201ENST00000508931 1278 ntBASIC14.26□□□□□ -0.13
BBS4Q96RK4 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.26□□□□□ -0.13
BBS4Q96RK4 AP005019.2-201ENST00000615104 511 ntBASIC14.26□□□□□ -0.13
BBS4Q96RK4 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 AL009178.2-201ENST00000597278 2719 ntBASIC14.26□□□□□ -0.13
BBS4Q96RK4 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BBS4Q96RK4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BBS4Q96RK4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.25□□□□□ -0.13
BBS4Q96RK4 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BBS4Q96RK4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BBS4Q96RK4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.25□□□□□ -0.13
BBS4Q96RK4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BBS4Q96RK4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.25□□□□□ -0.13
BBS4Q96RK4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.25□□□□□ -0.13
BBS4Q96RK4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BBS4Q96RK4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BBS4Q96RK4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
BBS4Q96RK4 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
BBS4Q96RK4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BBS4Q96RK4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BBS4Q96RK4 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BBS4Q96RK4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
BBS4Q96RK4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms