Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL773604.1-201ENST00000617417 272 ntBASIC11.44□□□□□ -0.58
AP1S3Q96PC3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
AP1S3Q96PC3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 WASH3P-207ENST00000560956 1394 ntBASIC11.43□□□□□ -0.58
AP1S3Q96PC3 FO538757.1-201ENST00000623083 1397 ntBASIC11.43□□□□□ -0.58
AP1S3Q96PC3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 BCAR1-209ENST00000546196 1340 ntBASIC11.43□□□□□ -0.58
AP1S3Q96PC3 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 RNA5SP410-201ENST00000516285 106 ntBASIC11.43□□□□□ -0.58
AP1S3Q96PC3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 AC068137.2-201ENST00000605408 478 ntBASIC11.43□□□□□ -0.58
AP1S3Q96PC3 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 PXMP4-203ENST00000409299 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 KRT8P37-201ENST00000451609 1420 ntBASIC11.43□□□□□ -0.58
AP1S3Q96PC3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
AP1S3Q96PC3 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.42□□□□□ -0.58
AP1S3Q96PC3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms