Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 DGCR5-201ENST00000399539 862 ntBASIC14.23□□□□□ -0.13
COL21A1Q96P44 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 GAPDHP40-201ENST00000505218 1006 ntBASIC14.23□□□□□ -0.13
COL21A1Q96P44 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 WASH4P-201ENST00000564273 1246 ntBASIC14.23□□□□□ -0.13
COL21A1Q96P44 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 AC093813.1-201ENST00000605066 256 ntBASIC14.23□□□□□ -0.13
COL21A1Q96P44 AC107373.2-201ENST00000607735 490 ntBASIC14.23□□□□□ -0.13
COL21A1Q96P44 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 AC025048.6-201ENST00000634326 1161 ntBASIC14.23□□□□□ -0.13
COL21A1Q96P44 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 HSPA7-201ENST00000445535 1927 ntBASIC14.23□□□□□ -0.13
COL21A1Q96P44 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL21A1Q96P44 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
COL21A1Q96P44 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 AL137784.3-201ENST00000623858 2288 ntBASIC14.22□□□□□ -0.13
COL21A1Q96P44 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 LINC01230-201ENST00000625222 3017 ntBASIC14.22□□□□□ -0.13
COL21A1Q96P44 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 C1QBPP1-201ENST00000400117 770 ntBASIC14.22□□□□□ -0.13
COL21A1Q96P44 SOCS2P1-201ENST00000417727 557 ntBASIC14.22□□□□□ -0.13
COL21A1Q96P44 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 AL358472.5-202ENST00000641448 1267 ntBASIC14.22□□□□□ -0.13
COL21A1Q96P44 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 LILRP1-201ENST00000444199 1370 ntBASIC14.22□□□□□ -0.13
COL21A1Q96P44 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
COL21A1Q96P44 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
COL21A1Q96P44 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms