Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.22□□□□□ -0.13
TM9SF4Q92544 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 RNA5SP486-201ENST00000515961 83 ntBASIC14.22□□□□□ -0.13
TM9SF4Q92544 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 AP001258.2-201ENST00000529891 490 ntBASIC14.22□□□□□ -0.13
TM9SF4Q92544 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 AC084346.2-201ENST00000607097 949 ntBASIC14.22□□□□□ -0.13
TM9SF4Q92544 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 AC068587.10-201ENST00000641210 219 ntBASIC14.22□□□□□ -0.13
TM9SF4Q92544 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TM9SF4Q92544 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.22□□□□□ -0.13
TM9SF4Q92544 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 BTBD6P1-201ENST00000412176 1267 ntBASIC14.21□□□□□ -0.13
TM9SF4Q92544 CD8B2-202ENST00000417670 633 ntBASIC14.21□□□□□ -0.13
TM9SF4Q92544 GPAA1P2-201ENST00000417923 928 ntBASIC14.21□□□□□ -0.13
TM9SF4Q92544 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 AC006033.1-201ENST00000440505 426 ntBASIC14.21□□□□□ -0.13
TM9SF4Q92544 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 AC114812.1-204ENST00000449669 728 ntBASIC14.21□□□□□ -0.13
TM9SF4Q92544 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.21□□□□□ -0.13
TM9SF4Q92544 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 AC145423.3-201ENST00000615987 467 ntBASIC14.21□□□□□ -0.13
TM9SF4Q92544 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TM9SF4Q92544 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.21□□□□□ -0.13
TM9SF4Q92544 AJ011931.1-201ENST00000618749 2492 ntBASIC14.21□□□□□ -0.13
TM9SF4Q92544 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
TM9SF4Q92544 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TM9SF4Q92544 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
TM9SF4Q92544 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TM9SF4Q92544 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TM9SF4Q92544 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
TM9SF4Q92544 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms