Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 MYADML-201ENST00000474610 2147 ntBASIC15.04■□□□□ -0
SLC44A1Q8WWI5 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
SLC44A1Q8WWI5 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 AL139094.1-201ENST00000405549 1188 ntBASIC15.03■□□□□ -0
SLC44A1Q8WWI5 VDAC1P7-201ENST00000462417 847 ntBASIC15.03■□□□□ -0
SLC44A1Q8WWI5 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 RARRES2P5-201ENST00000564013 466 ntBASIC15.03■□□□□ -0
SLC44A1Q8WWI5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 AC093813.1-201ENST00000605066 256 ntBASIC15.03■□□□□ -0
SLC44A1Q8WWI5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC44A1Q8WWI5 AL137784.3-201ENST00000623858 2288 ntBASIC15.03■□□□□ -0
SLC44A1Q8WWI5 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 CICP16-201ENST00000502609 2813 ntBASIC15.02■□□□□ -0
SLC44A1Q8WWI5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 TREML5P-201ENST00000421694 576 ntBASIC15.02■□□□□ -0
SLC44A1Q8WWI5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 AC026434.2-201ENST00000506094 1078 ntBASIC15.02■□□□□ -0
SLC44A1Q8WWI5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.02■□□□□ -0
SLC44A1Q8WWI5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.02□□□□□ -0.01
SLC44A1Q8WWI5 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms