Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NEIL3Q8TAT5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEIL3Q8TAT5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NEIL3Q8TAT5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEIL3Q8TAT5 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NEIL3Q8TAT5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NEIL3Q8TAT5 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.01□□□□□ -0.17
NEIL3Q8TAT5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ACKR1-201ENST00000368121 1240 ntBASIC14□□□□□ -0.17
NEIL3Q8TAT5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 CROCCP4-201ENST00000457096 498 ntBASIC14□□□□□ -0.17
NEIL3Q8TAT5 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 GAPDHP40-201ENST00000505218 1006 ntBASIC14□□□□□ -0.17
NEIL3Q8TAT5 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14□□□□□ -0.17
NEIL3Q8TAT5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14□□□□□ -0.17
NEIL3Q8TAT5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 AC012441.1-201ENST00000446669 685 ntBASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 AC093433.1-201ENST00000458048 571 ntBASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 AP001889.1-201ENST00000525414 633 ntBASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 AP005482.1-201ENST00000563722 1273 ntBASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.99□□□□□ -0.17
NEIL3Q8TAT5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms