Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NUP43Q8NFH3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 AC097359.2-201ENST00000604992 2389 ntBASIC14.04□□□□□ -0.16
NUP43Q8NFH3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 AP006294.1-201ENST00000415407 339 ntBASIC14.04□□□□□ -0.16
NUP43Q8NFH3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 SNX18-202ENST00000343017 3140 ntBASIC14.04□□□□□ -0.16
NUP43Q8NFH3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 SALL4P5-201ENST00000419001 1760 ntBASIC14.04□□□□□ -0.16
NUP43Q8NFH3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NUP43Q8NFH3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 AP001267.2-201ENST00000532619 2086 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 ACTG1P3-201ENST00000431775 1114 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 AC007969.1-201ENST00000433675 447 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 FO681548.1-201ENST00000455617 1132 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 PTP4A1P2-201ENST00000546033 454 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 AC138761.1-201ENST00000584393 385 ntBASIC14.03□□□□□ -0.16
NUP43Q8NFH3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NUP43Q8NFH3 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms