Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC23■■□□□ 1.27
VPS8Q8N3P4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
VPS8Q8N3P4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC23■■□□□ 1.27
VPS8Q8N3P4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 AL161932.2-201ENST00000435436 679 ntBASIC23■■□□□ 1.27
VPS8Q8N3P4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC23■■□□□ 1.27
VPS8Q8N3P4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC23■■□□□ 1.27
VPS8Q8N3P4 AC024681.1-201ENST00000521917 487 ntBASIC23■■□□□ 1.27
VPS8Q8N3P4 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC23■■□□□ 1.27
VPS8Q8N3P4 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
VPS8Q8N3P4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
VPS8Q8N3P4 MIR6074-201ENST00000612054 107 ntBASIC23■■□□□ 1.27
VPS8Q8N3P4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC23■■□□□ 1.27
VPS8Q8N3P4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
VPS8Q8N3P4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC23■■□□□ 1.27
VPS8Q8N3P4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC23■■□□□ 1.27
VPS8Q8N3P4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
VPS8Q8N3P4 AC064801.2-201ENST00000625052 1303 ntBASIC23■■□□□ 1.27
VPS8Q8N3P4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC23■■□□□ 1.27
VPS8Q8N3P4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 RN7SL774P-201ENST00000577467 290 ntBASIC22.99■■□□□ 1.27
VPS8Q8N3P4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 KRT8P21-201ENST00000430398 1491 ntBASIC22.99■■□□□ 1.27
VPS8Q8N3P4 RN7SKP214-201ENST00000364208 315 ntBASIC22.99■■□□□ 1.27
VPS8Q8N3P4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 PGAM1P5-201ENST00000548011 764 ntBASIC22.99■■□□□ 1.27
VPS8Q8N3P4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AC104506.1-201ENST00000609247 429 ntBASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AF254983.2-201ENST00000612331 135 ntBASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AL021578.1-201ENST00000613646 709 ntBASIC22.99■■□□□ 1.27
VPS8Q8N3P4 AC091544.8-201ENST00000619490 361 ntBASIC22.99■■□□□ 1.27
VPS8Q8N3P4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
VPS8Q8N3P4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 AHCYP4-201ENST00000419201 1315 ntBASIC22.98■■□□□ 1.27
VPS8Q8N3P4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
VPS8Q8N3P4 RN7SL11P-201ENST00000471305 293 ntBASIC22.98■■□□□ 1.27
VPS8Q8N3P4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms