Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AC105206.1-202ENST00000314927 2368 ntBASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 SPDYE7P-202ENST00000420373 878 ntBASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AP000344.2-201ENST00000512987 629 ntBASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AC130686.1-201ENST00000622936 2466 ntBASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AC093525.8-201ENST00000624099 1342 ntBASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LRRTM1Q86UE6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 AC067750.1-201ENST00000608826 6545 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 AC020910.6-201ENST00000623084 1459 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 HLA-V-204ENST00000476601 1289 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 POLD2P1-201ENST00000511220 997 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 SDHAP3-202ENST00000515467 728 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 KRT18P58-201ENST00000527480 1120 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 MIR4469-201ENST00000583919 79 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 AC004835.2-201ENST00000603762 682 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 TEX28P1-201ENST00000613479 1221 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 TEX28P2-201ENST00000617764 1221 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 AC004461.2-201ENST00000629517 803 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.05□□□□□ -0.32
LRRTM1Q86UE6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
LRRTM1Q86UE6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms