Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC148477.9-201ENST00000623974 539 ntBASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 AC009145.4-201ENST00000625119 1294 ntBASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KRT28Q7Z3Y7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 JTB-202ENST00000356648 1040 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 AC055811.3-201ENST00000584952 686 ntBASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 EIF5AP2-201ENST00000585668 1047 ntBASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
KRT28Q7Z3Y7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 AL136172.1-201ENST00000598590 1394 ntBASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 API5-203ENST00000455725 2257 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 SSR4P1-203ENST00000599569 2260 ntBASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 MROH4P-201ENST00000431302 1578 ntBASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 AC023024.2-201ENST00000623561 1993 ntBASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 AC006372.4-201ENST00000624122 1543 ntBASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 AC018638.5-201ENST00000450885 754 ntBASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 PPIA-208ENST00000489459 907 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 PGAM1P12-201ENST00000505622 748 ntBASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 OR5BD1P-201ENST00000532527 817 ntBASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 PPIA-210ENST00000620047 827 ntTSL 5 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.83■□□□□ 0.77
KRT28Q7Z3Y7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 FAM90A21P-201ENST00000510875 1396 ntBASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 FAM90A15P-201ENST00000514465 1395 ntBASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 FAM90A6P-201ENST00000515148 1394 ntBASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 FAM90A16P-201ENST00000526662 1395 ntBASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 FAM90A9P-201ENST00000527940 1395 ntBASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 FAM90A5P-201ENST00000528738 1395 ntBASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 FAM90A14P-201ENST00000530386 1395 ntBASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 FAM90A13P-201ENST00000534703 1395 ntBASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
KRT28Q7Z3Y7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.82■□□□□ 0.76
KRT28Q7Z3Y7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms