Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 AC132938.4-201ENST00000623835 848 ntBASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 AC005912.2-201ENST00000619492 2400 ntBASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 LINC00552-201ENST00000625151 2579 ntBASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 AL137784.3-201ENST00000623858 2288 ntBASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
LYSMD3Q7Z3D4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
LYSMD3Q7Z3D4 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 TPM3P8-201ENST00000330554 643 ntBASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 AC018529.2-202ENST00000611482 3087 ntBASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
LYSMD3Q7Z3D4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 ANKRD19P-201ENST00000338192 862 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 MIR1909-201ENST00000411312 80 ntBASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.07■□□□□ 0
LYSMD3Q7Z3D4 CNN2P8-201ENST00000421872 913 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms