Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.21□□□□□ -0.29
C11orf88Q6PI97 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
C11orf88Q6PI97 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.21□□□□□ -0.3
C11orf88Q6PI97 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
C11orf88Q6PI97 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
C11orf88Q6PI97 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
C11orf88Q6PI97 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
C11orf88Q6PI97 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC109322.1-201ENST00000524499 1264 ntBASIC13.2□□□□□ -0.3
C11orf88Q6PI97 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC069262.1-201ENST00000539058 672 ntBASIC13.2□□□□□ -0.3
C11orf88Q6PI97 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC243562.1-201ENST00000560672 389 ntBASIC13.2□□□□□ -0.3
C11orf88Q6PI97 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 MAPK10-262ENST00000641051 5738 ntBASIC13.2□□□□□ -0.3
C11orf88Q6PI97 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC092135.3-201ENST00000624151 1846 ntBASIC13.2□□□□□ -0.3
C11orf88Q6PI97 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 AC097359.2-201ENST00000604992 2389 ntBASIC13.2□□□□□ -0.3
C11orf88Q6PI97 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
C11orf88Q6PI97 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
C11orf88Q6PI97 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms