Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC62Q6P9F0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC62Q6P9F0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC62Q6P9F0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC62Q6P9F0 KRT8P19-201ENST00000551916 1455 ntBASIC16.8■□□□□ 0.28
CCDC62Q6P9F0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 TLE1P1-201ENST00000422965 589 ntBASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 PUDPP3-201ENST00000445368 636 ntBASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 IMP3P2-201ENST00000489760 475 ntBASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 ALG3P1-201ENST00000508806 1114 ntBASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 AC132192.2-201ENST00000596206 1147 ntBASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 AC104640.1-201ENST00000562617 2109 ntBASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC62Q6P9F0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC006058.4-201ENST00000624016 1670 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 ACTG1P2-201ENST00000415776 1125 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 ACTG1P11-201ENST00000425411 1125 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 FAM58BP-201ENST00000439056 645 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 VDAC1P1-201ENST00000439229 848 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC079328.1-201ENST00000560358 952 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 SNORD3B-2-202ENST00000571722 791 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC016629.1-201ENST00000596579 586 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 BX088702.1-201ENST00000610784 235 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC090164.2-201ENST00000611487 516 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC015967.2-201ENST00000624092 234 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC006435.4-201ENST00000625037 234 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AL356737.1-201ENST00000634391 234 ntBASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC62Q6P9F0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms