Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 GGTLC4P-201ENST00000402176 664 ntBASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 IFNWP2-201ENST00000431203 580 ntBASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 CDCA4P4-201ENST00000435216 680 ntBASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 BPIFB5P-201ENST00000457066 1099 ntBASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 RN7SL602P-201ENST00000578326 324 ntBASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 MIR4254-201ENST00000581063 76 ntBASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 RN7SL718P-201ENST00000581254 303 ntBASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
HIST2H2BCQ6DN03 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AC011676.5-201ENST00000624864 2660 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 PYY2-201ENST00000315776 282 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 MIR648-201ENST00000385046 94 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AC098657.1-201ENST00000416270 1135 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AC104961.1-201ENST00000427605 771 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 OR2R1P-201ENST00000441404 914 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AC092896.1-201ENST00000465850 380 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 RN7SL277P-201ENST00000481521 288 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AC013553.1-201ENST00000560906 267 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AC006116.2-201ENST00000589958 988 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 NF1P11-201ENST00000621292 1282 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 AC020922.4-201ENST00000621389 339 ntBASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HIST2H2BCQ6DN03 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.58□□□□□ -0.39
HIST2H2BCQ6DN03 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.58□□□□□ -0.39
HIST2H2BCQ6DN03 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HIST2H2BCQ6DN03 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.58□□□□□ -0.4
HIST2H2BCQ6DN03 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST2H2BCQ6DN03 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.58□□□□□ -0.4
HIST2H2BCQ6DN03 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HIST2H2BCQ6DN03 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms