Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 SALL4P5-201ENST00000419001 1760 ntBASIC15.87■□□□□ 0.13
VARS2Q5ST30 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.87■□□□□ 0.13
VARS2Q5ST30 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VARS2Q5ST30 AC105917.1-201ENST00000506637 2539 ntBASIC15.87■□□□□ 0.13
VARS2Q5ST30 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 PPT1-215ENST00000641471 2368 ntBASIC15.86■□□□□ 0.13
VARS2Q5ST30 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 LDHBP1-201ENST00000455730 1119 ntBASIC15.86■□□□□ 0.13
VARS2Q5ST30 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.86■□□□□ 0.13
VARS2Q5ST30 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 AC105129.2-201ENST00000559536 390 ntBASIC15.86■□□□□ 0.13
VARS2Q5ST30 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 AC020763.2-201ENST00000623155 1255 ntBASIC15.86■□□□□ 0.13
VARS2Q5ST30 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 AC004923.1-202ENST00000642106 209 ntBASIC15.86■□□□□ 0.13
VARS2Q5ST30 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VARS2Q5ST30 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 AC138035.3-201ENST00000622706 2791 ntBASIC15.86■□□□□ 0.13
VARS2Q5ST30 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VARS2Q5ST30 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC004899.1-201ENST00000424687 1714 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC013470.3-201ENST00000420252 1194 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC104073.2-201ENST00000453737 312 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC106794.1-201ENST00000506935 792 ntBASIC15.85■□□□□ 0.13
VARS2Q5ST30 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.85■□□□□ 0.13
VARS2Q5ST30 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms