Protein–RNA interactions for Protein: Q59GN2

RPL39P5, Putative 60S ribosomal protein L39-like 5, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P5Q59GN2 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 SOCS2P1-201ENST00000417727 557 ntBASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AL442647.2-201ENST00000429864 857 ntBASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 TSPY16P-201ENST00000449843 468 ntBASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AC092552.1-201ENST00000547243 906 ntBASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 CHCHD2P3-201ENST00000603038 451 ntBASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 PRSS30P-206ENST00000641773 873 ntBASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RPL39P5Q59GN2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 KRT8P14-201ENST00000414254 1442 ntBASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 MYCLP2-201ENST00000449268 967 ntBASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 AJ011932.1-201ENST00000621707 465 ntBASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RPL39P5Q59GN2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.3□□□□□ -0.44
RPL39P5Q59GN2 AC055811.4-201ENST00000624039 1754 ntBASIC12.3□□□□□ -0.44
RPL39P5Q59GN2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P5Q59GN2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P5Q59GN2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.3□□□□□ -0.44
RPL39P5Q59GN2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
RPL39P5Q59GN2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms