Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 FGD5P1-202ENST00000614866 2498 ntBASIC20.53■□□□□ 0.88
CDCA8Q53HL2 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDCA8Q53HL2 NORAD-201ENST00000565493 5339 ntBASIC20.52■□□□□ 0.88
CDCA8Q53HL2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 SLC9A7P1-201ENST00000554295 3311 ntBASIC20.52■□□□□ 0.88
CDCA8Q53HL2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 BNIP3P13-201ENST00000599968 566 ntBASIC20.52■□□□□ 0.88
CDCA8Q53HL2 AC009884.2-201ENST00000603110 324 ntBASIC20.52■□□□□ 0.88
CDCA8Q53HL2 AP000346.4-201ENST00000614827 381 ntBASIC20.52■□□□□ 0.88
CDCA8Q53HL2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 AC022748.3-201ENST00000621828 275 ntBASIC20.52■□□□□ 0.88
CDCA8Q53HL2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC20.52■□□□□ 0.88
CDCA8Q53HL2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC20.52■□□□□ 0.87
CDCA8Q53HL2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDCA8Q53HL2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CDCA8Q53HL2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDCA8Q53HL2 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.87
CDCA8Q53HL2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDCA8Q53HL2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDCA8Q53HL2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 AMT-239ENST00000636865 1914 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 CSH2-202ENST00000345366 598 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 HNRNPA1P32-201ENST00000396326 963 ntBASIC20.51■□□□□ 0.87
CDCA8Q53HL2 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 AC103988.2-201ENST00000561804 725 ntBASIC20.51■□□□□ 0.87
CDCA8Q53HL2 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 MIR6787-201ENST00000616675 61 ntBASIC20.51■□□□□ 0.87
CDCA8Q53HL2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 AC139712.1-201ENST00000378256 1875 ntBASIC20.51■□□□□ 0.87
CDCA8Q53HL2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 AC244394.1-201ENST00000435000 1665 ntBASIC20.51■□□□□ 0.87
CDCA8Q53HL2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDCA8Q53HL2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CDCA8Q53HL2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms