Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 AL136172.1-201ENST00000598590 1394 ntBASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.13■□□□□ 0.17
DCAF4L1Q3SXM0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 AC092135.3-201ENST00000624151 1846 ntBASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 LINC00554-201ENST00000564841 3011 ntBASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 SCARNA20.5-201ENST00000516991 142 ntBASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 BNIP3P13-201ENST00000599968 566 ntBASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 AC022748.3-201ENST00000621828 275 ntBASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 AC027601.3-201ENST00000622907 509 ntBASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 AL133338.1-201ENST00000565695 1517 ntBASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DCAF4L1Q3SXM0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 AC138028.6-201ENST00000616106 1482 ntBASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 AC011270.2-201ENST00000624293 2550 ntBASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 CICP12-201ENST00000455801 843 ntBASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 AC106794.1-201ENST00000506935 792 ntBASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 CICP23-201ENST00000605013 2741 ntBASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DCAF4L1Q3SXM0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms