Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 MIR4754-201ENST00000582477 89 ntBASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.31■□□□□ 0.36
SHROOM1Q2M3G4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 AC006504.5-208ENST00000588784 2401 ntBASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 FAM58BP-201ENST00000439056 645 ntBASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 TMEM198B-204ENST00000484016 896 ntBASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 AC090857.1-201ENST00000527400 390 ntBASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 KRT8P21-201ENST00000430398 1491 ntBASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SHROOM1Q2M3G4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 MPRIPP1-201ENST00000452433 1089 ntBASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 AC009884.2-201ENST00000603110 324 ntBASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 AL109837.1-201ENST00000603272 613 ntBASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 NAP1L6-202ENST00000641404 1222 ntBASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHROOM1Q2M3G4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms