Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.88■□□□□ 0.29
HTRA3P83110 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.88■□□□□ 0.29
HTRA3P83110 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.88■□□□□ 0.29
HTRA3P83110 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.88■□□□□ 0.29
HTRA3P83110 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.88■□□□□ 0.29
HTRA3P83110 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HTRA3P83110 CICP11-201ENST00000434745 2827 ntBASIC16.88■□□□□ 0.29
HTRA3P83110 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 SALL4P5-201ENST00000419001 1760 ntBASIC16.87■□□□□ 0.29
HTRA3P83110 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.87■□□□□ 0.29
HTRA3P83110 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.87■□□□□ 0.29
HTRA3P83110 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HTRA3P83110 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.87■□□□□ 0.29
HTRA3P83110 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.87■□□□□ 0.29
HTRA3P83110 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HTRA3P83110 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HTRA3P83110 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.87■□□□□ 0.29
HTRA3P83110 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
HTRA3P83110 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC16.87■□□□□ 0.29
HTRA3P83110 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC16.87■□□□□ 0.29
HTRA3P83110 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC16.87■□□□□ 0.29
HTRA3P83110 BOLA3P2-201ENST00000586496 323 ntBASIC16.87■□□□□ 0.29
HTRA3P83110 EMP3-204ENST00000596315 761 ntTSL 2 BASIC16.87■□□□□ 0.29
HTRA3P83110 AC087072.1-201ENST00000603727 421 ntBASIC16.87■□□□□ 0.29
HTRA3P83110 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.87■□□□□ 0.29
HTRA3P83110 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
HTRA3P83110 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.87■□□□□ 0.29
HTRA3P83110 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HTRA3P83110 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.87■□□□□ 0.29
HTRA3P83110 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC16.87■□□□□ 0.29
HTRA3P83110 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HTRA3P83110 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 AL139384.1-201ENST00000612143 3047 ntBASIC16.86■□□□□ 0.29
HTRA3P83110 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
HTRA3P83110 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
HTRA3P83110 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 MIR339-201ENST00000362153 94 ntBASIC16.86■□□□□ 0.29
HTRA3P83110 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
HTRA3P83110 MIR1226-201ENST00000408658 75 ntBASIC16.86■□□□□ 0.29
HTRA3P83110 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC16.86■□□□□ 0.29
HTRA3P83110 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC16.86■□□□□ 0.29
HTRA3P83110 AP003040.1-201ENST00000532044 1024 ntBASIC16.86■□□□□ 0.29
HTRA3P83110 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
HTRA3P83110 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC16.86■□□□□ 0.29
HTRA3P83110 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC16.86■□□□□ 0.29
HTRA3P83110 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC16.86■□□□□ 0.29
HTRA3P83110 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.86■□□□□ 0.29
HTRA3P83110 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.86■□□□□ 0.29
HTRA3P83110 AL133467.4-201ENST00000602953 725 ntBASIC16.86■□□□□ 0.29
HTRA3P83110 AC048382.6-201ENST00000621980 1223 ntBASIC16.86■□□□□ 0.29
HTRA3P83110 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
HTRA3P83110 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
HTRA3P83110 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC16.86■□□□□ 0.29
HTRA3P83110 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms