Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
YBX1P67809 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.61□□□□□ -0.07
YBX1P67809 SNX29P1-201ENST00000548357 1007 ntBASIC14.61□□□□□ -0.07
YBX1P67809 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.61□□□□□ -0.07
YBX1P67809 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.61□□□□□ -0.07
YBX1P67809 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 AL512343.1-201ENST00000605837 169 ntBASIC14.61□□□□□ -0.07
YBX1P67809 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.61□□□□□ -0.07
YBX1P67809 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
YBX1P67809 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
YBX1P67809 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.61□□□□□ -0.07
YBX1P67809 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.61□□□□□ -0.07
YBX1P67809 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
YBX1P67809 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.61□□□□□ -0.07
YBX1P67809 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.6□□□□□ -0.07
YBX1P67809 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
YBX1P67809 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.6□□□□□ -0.07
YBX1P67809 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
YBX1P67809 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
YBX1P67809 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.6□□□□□ -0.07
YBX1P67809 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
YBX1P67809 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.6□□□□□ -0.07
YBX1P67809 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.6□□□□□ -0.07
YBX1P67809 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.6□□□□□ -0.07
YBX1P67809 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 AL355864.2-201ENST00000447420 863 ntBASIC14.6□□□□□ -0.07
YBX1P67809 AL590640.2-201ENST00000457038 527 ntBASIC14.6□□□□□ -0.07
YBX1P67809 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.6□□□□□ -0.07
YBX1P67809 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.6□□□□□ -0.07
YBX1P67809 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.6□□□□□ -0.07
YBX1P67809 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.6□□□□□ -0.07
YBX1P67809 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.6□□□□□ -0.07
YBX1P67809 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
YBX1P67809 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.6□□□□□ -0.07
YBX1P67809 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
YBX1P67809 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
YBX1P67809 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.59□□□□□ -0.07
YBX1P67809 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
YBX1P67809 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
YBX1P67809 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
YBX1P67809 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
YBX1P67809 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.59□□□□□ -0.07
YBX1P67809 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.59□□□□□ -0.07
YBX1P67809 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
YBX1P67809 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 AC022616.1-201ENST00000518688 554 ntBASIC14.59□□□□□ -0.07
YBX1P67809 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.59□□□□□ -0.07
YBX1P67809 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.59□□□□□ -0.07
YBX1P67809 AL022328.1-201ENST00000610050 478 ntBASIC14.59□□□□□ -0.07
YBX1P67809 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.59□□□□□ -0.07
YBX1P67809 AL162274.1-201ENST00000617191 1098 ntBASIC14.59□□□□□ -0.07
YBX1P67809 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.59□□□□□ -0.07
YBX1P67809 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.59□□□□□ -0.07
YBX1P67809 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.59□□□□□ -0.07
YBX1P67809 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.59□□□□□ -0.07
YBX1P67809 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.59□□□□□ -0.07
YBX1P67809 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
YBX1P67809 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.59□□□□□ -0.07
YBX1P67809 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.59□□□□□ -0.07
YBX1P67809 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms