Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.92□□□□□ -0.34
AP3S2P59780 AC087388.1-201ENST00000571370 1112 ntBASIC12.92□□□□□ -0.34
AP3S2P59780 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 NKG7-205ENST00000600427 520 ntTSL 3 BASIC12.92□□□□□ -0.34
AP3S2P59780 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S2P59780 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 AC020658.7-201ENST00000624274 2442 ntBASIC12.92□□□□□ -0.34
AP3S2P59780 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S2P59780 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S2P59780 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S2P59780 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S2P59780 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S2P59780 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
AP3S2P59780 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S2P59780 FO393414.2-201ENST00000405153 598 ntBASIC12.91□□□□□ -0.34
AP3S2P59780 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
AP3S2P59780 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 HCG4B-203ENST00000450128 991 ntBASIC12.91□□□□□ -0.34
AP3S2P59780 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.91□□□□□ -0.34
AP3S2P59780 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.91□□□□□ -0.34
AP3S2P59780 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 AF238378.1-201ENST00000526806 358 ntBASIC12.91□□□□□ -0.34
AP3S2P59780 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 RARRES2P8-201ENST00000566335 367 ntBASIC12.91□□□□□ -0.34
AP3S2P59780 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 MIR3652-201ENST00000579335 131 ntBASIC12.91□□□□□ -0.34
AP3S2P59780 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 TP73-AS1-207ENST00000624167 988 ntBASIC12.91□□□□□ -0.34
AP3S2P59780 AC008267.7-201ENST00000624570 1194 ntBASIC12.91□□□□□ -0.34
AP3S2P59780 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
AP3S2P59780 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S2P59780 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
AP3S2P59780 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S2P59780 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 AC114271.1-201ENST00000612689 2813 ntBASIC12.91□□□□□ -0.34
AP3S2P59780 OR2I1P-208ENST00000641137 4948 ntBASIC12.91□□□□□ -0.34
AP3S2P59780 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
AP3S2P59780 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.91□□□□□ -0.34
AP3S2P59780 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
AP3S2P59780 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.91□□□□□ -0.34
AP3S2P59780 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
AP3S2P59780 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.91□□□□□ -0.34
AP3S2P59780 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S2P59780 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S2P59780 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S2P59780 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.9□□□□□ -0.34
AP3S2P59780 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.9□□□□□ -0.34
AP3S2P59780 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
AP3S2P59780 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S2P59780 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12.9□□□□□ -0.34
AP3S2P59780 AC142381.1-201ENST00000426099 345 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms