Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.14■□□□□ 0.01
WNT3AP56704 AC005225.4-201ENST00000557330 545 ntBASIC15.14■□□□□ 0.01
WNT3AP56704 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.14■□□□□ 0.01
WNT3AP56704 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.14■□□□□ 0.01
WNT3AP56704 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.14■□□□□ 0.01
WNT3AP56704 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.14■□□□□ 0.01
WNT3AP56704 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.14■□□□□ 0.01
WNT3AP56704 AL022328.1-201ENST00000610050 478 ntBASIC15.14■□□□□ 0.01
WNT3AP56704 AC138466.3-201ENST00000619983 221 ntBASIC15.14■□□□□ 0.01
WNT3AP56704 AC132938.4-201ENST00000623835 848 ntBASIC15.14■□□□□ 0.01
WNT3AP56704 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
WNT3AP56704 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
WNT3AP56704 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.14■□□□□ 0.01
WNT3AP56704 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
WNT3AP56704 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
WNT3AP56704 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
WNT3AP56704 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.14■□□□□ 0.01
WNT3AP56704 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
WNT3AP56704 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
WNT3AP56704 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.14■□□□□ 0.01
WNT3AP56704 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
WNT3AP56704 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
WNT3AP56704 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
WNT3AP56704 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
WNT3AP56704 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 AC007191.1-201ENST00000623179 2995 ntBASIC15.13■□□□□ 0.01
WNT3AP56704 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.13■□□□□ 0.01
WNT3AP56704 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
WNT3AP56704 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.13■□□□□ 0.01
WNT3AP56704 TPM3P8-201ENST00000330554 643 ntBASIC15.13■□□□□ 0.01
WNT3AP56704 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 RN7SKP230-201ENST00000365642 335 ntBASIC15.13■□□□□ 0.01
WNT3AP56704 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.13■□□□□ 0.01
WNT3AP56704 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
WNT3AP56704 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
WNT3AP56704 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.13■□□□□ 0.01
WNT3AP56704 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.13■□□□□ 0.01
WNT3AP56704 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 AC097359.2-201ENST00000604992 2389 ntBASIC15.13■□□□□ 0.01
WNT3AP56704 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 AP001267.2-201ENST00000532619 2086 ntBASIC15.13■□□□□ 0.01
WNT3AP56704 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC15.13■□□□□ 0.01
WNT3AP56704 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
WNT3AP56704 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3AP56704 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
WNT3AP56704 AC011840.2-201ENST00000563063 1520 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
WNT3AP56704 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.12■□□□□ 0.01
WNT3AP56704 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
WNT3AP56704 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
WNT3AP56704 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
WNT3AP56704 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
WNT3AP56704 C2orf27AP3-201ENST00000434123 579 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 KRT17P7-201ENST00000451704 1104 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 FTH1P14-201ENST00000482930 551 ntBASIC15.12■□□□□ 0.01
WNT3AP56704 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
WNT3AP56704 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
WNT3AP56704 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms