Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.88■□□□□ 0.29
EPHB4P54760 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
EPHB4P54760 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.88■□□□□ 0.29
EPHB4P54760 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 ACTG1P2-201ENST00000415776 1125 ntBASIC16.88■□□□□ 0.29
EPHB4P54760 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.88■□□□□ 0.29
EPHB4P54760 AC079178.1-201ENST00000420915 656 ntBASIC16.88■□□□□ 0.29
EPHB4P54760 ACTG1P11-201ENST00000425411 1125 ntBASIC16.88■□□□□ 0.29
EPHB4P54760 Z97180.1-201ENST00000445173 988 ntBASIC16.88■□□□□ 0.29
EPHB4P54760 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 NUP210P1-202ENST00000504322 710 ntBASIC16.88■□□□□ 0.29
EPHB4P54760 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.88■□□□□ 0.29
EPHB4P54760 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.88■□□□□ 0.29
EPHB4P54760 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
EPHB4P54760 AL645939.5-201ENST00000606834 243 ntBASIC16.88■□□□□ 0.29
EPHB4P54760 AL353726.2-201ENST00000623259 884 ntBASIC16.88■□□□□ 0.29
EPHB4P54760 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
EPHB4P54760 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
EPHB4P54760 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
EPHB4P54760 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.88■□□□□ 0.29
EPHB4P54760 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.88■□□□□ 0.29
EPHB4P54760 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EPHB4P54760 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EPHB4P54760 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
EPHB4P54760 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 AC148477.4-201ENST00000613430 1793 ntBASIC16.87■□□□□ 0.29
EPHB4P54760 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHB4P54760 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
EPHB4P54760 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
EPHB4P54760 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHB4P54760 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
EPHB4P54760 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 AC104784.1-201ENST00000473096 294 ntBASIC16.87■□□□□ 0.29
EPHB4P54760 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.87■□□□□ 0.29
EPHB4P54760 AC022217.1-201ENST00000521069 738 ntBASIC16.87■□□□□ 0.29
EPHB4P54760 AC024681.1-201ENST00000521917 487 ntBASIC16.87■□□□□ 0.29
EPHB4P54760 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.87■□□□□ 0.29
EPHB4P54760 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
EPHB4P54760 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHB4P54760 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 AL359258.3-201ENST00000622910 2331 ntBASIC16.87■□□□□ 0.29
EPHB4P54760 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
EPHB4P54760 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.87■□□□□ 0.29
EPHB4P54760 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB4P54760 AC090616.6-203ENST00000579186 1945 ntBASIC16.86■□□□□ 0.29
EPHB4P54760 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB4P54760 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB4P54760 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
EPHB4P54760 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB4P54760 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB4P54760 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB4P54760 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB4P54760 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB4P54760 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.86■□□□□ 0.29
EPHB4P54760 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
EPHB4P54760 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
EPHB4P54760 AL133267.1-201ENST00000398220 340 ntBASIC16.86■□□□□ 0.29
EPHB4P54760 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
EPHB4P54760 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms