Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
PDX1P52945 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.56□□□□□ -0.08
PDX1P52945 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PDX1P52945 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.56□□□□□ -0.08
PDX1P52945 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.56□□□□□ -0.08
PDX1P52945 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.56□□□□□ -0.08
PDX1P52945 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.56□□□□□ -0.08
PDX1P52945 CHMP1AP1-201ENST00000445563 662 ntBASIC14.56□□□□□ -0.08
PDX1P52945 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.56□□□□□ -0.08
PDX1P52945 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.56□□□□□ -0.08
PDX1P52945 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.56□□□□□ -0.08
PDX1P52945 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.56□□□□□ -0.08
PDX1P52945 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.56□□□□□ -0.08
PDX1P52945 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.56□□□□□ -0.08
PDX1P52945 AL645728.2-202ENST00000641679 227 ntBASIC14.56□□□□□ -0.08
PDX1P52945 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 AC023824.1-201ENST00000562945 2975 ntBASIC14.56□□□□□ -0.08
PDX1P52945 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PDX1P52945 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.56□□□□□ -0.08
PDX1P52945 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PDX1P52945 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
PDX1P52945 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PDX1P52945 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.55□□□□□ -0.08
PDX1P52945 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.55□□□□□ -0.08
PDX1P52945 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.55□□□□□ -0.08
PDX1P52945 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
PDX1P52945 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PDX1P52945 CYP46A4P-201ENST00000414953 267 ntBASIC14.55□□□□□ -0.08
PDX1P52945 SPTLC1P5-201ENST00000450718 252 ntBASIC14.55□□□□□ -0.08
PDX1P52945 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.55□□□□□ -0.08
PDX1P52945 AC022616.1-201ENST00000518688 554 ntBASIC14.55□□□□□ -0.08
PDX1P52945 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.55□□□□□ -0.08
PDX1P52945 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
PDX1P52945 AC004466.1-201ENST00000599515 1080 ntBASIC14.55□□□□□ -0.08
PDX1P52945 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.55□□□□□ -0.08
PDX1P52945 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
PDX1P52945 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.55□□□□□ -0.08
PDX1P52945 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 KRT8P19-201ENST00000551916 1455 ntBASIC14.55□□□□□ -0.08
PDX1P52945 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.55□□□□□ -0.08
PDX1P52945 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.55□□□□□ -0.08
PDX1P52945 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PDX1P52945 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PDX1P52945 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PDX1P52945 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms