Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.8■□□□□ 0.12
LHX1P48742 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX1P48742 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.79■□□□□ 0.12
LHX1P48742 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX1P48742 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX1P48742 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 KRT8P29-201ENST00000420409 1371 ntBASIC15.79■□□□□ 0.12
LHX1P48742 AL136172.1-201ENST00000598590 1394 ntBASIC15.79■□□□□ 0.12
LHX1P48742 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
LHX1P48742 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 AC046158.3-201ENST00000624947 2558 ntBASIC15.79■□□□□ 0.12
LHX1P48742 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
LHX1P48742 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.79■□□□□ 0.12
LHX1P48742 TUBB8P8-201ENST00000458717 1058 ntBASIC15.79■□□□□ 0.12
LHX1P48742 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 AC021723.1-201ENST00000486306 515 ntBASIC15.79■□□□□ 0.12
LHX1P48742 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.79■□□□□ 0.12
LHX1P48742 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.79■□□□□ 0.12
LHX1P48742 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.79■□□□□ 0.12
LHX1P48742 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.79■□□□□ 0.12
LHX1P48742 AC100827.2-201ENST00000563214 1194 ntBASIC15.79■□□□□ 0.12
LHX1P48742 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX1P48742 AC027601.3-201ENST00000622907 509 ntBASIC15.79■□□□□ 0.12
LHX1P48742 AL162426.1-201ENST00000624141 743 ntBASIC15.79■□□□□ 0.12
LHX1P48742 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 AC092135.3-201ENST00000624151 1846 ntBASIC15.79■□□□□ 0.12
LHX1P48742 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.79■□□□□ 0.12
LHX1P48742 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
LHX1P48742 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX1P48742 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LHX1P48742 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX1P48742 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LHX1P48742 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.78■□□□□ 0.12
LHX1P48742 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX1P48742 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX1P48742 KRT8P13-201ENST00000463294 1010 ntBASIC15.78■□□□□ 0.12
LHX1P48742 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.78■□□□□ 0.12
LHX1P48742 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LHX1P48742 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.78■□□□□ 0.12
LHX1P48742 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 AC005730.2-201ENST00000564549 1184 ntBASIC15.78■□□□□ 0.12
LHX1P48742 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.78■□□□□ 0.12
LHX1P48742 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 AC132192.2-201ENST00000596206 1147 ntBASIC15.78■□□□□ 0.12
LHX1P48742 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.78■□□□□ 0.12
LHX1P48742 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LHX1P48742 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.78■□□□□ 0.12
LHX1P48742 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LHX1P48742 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LHX1P48742 E2F3P2-201ENST00000447755 1422 ntBASIC15.77■□□□□ 0.12
LHX1P48742 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LHX1P48742 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.77■□□□□ 0.12
LHX1P48742 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LHX1P48742 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX1P48742 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.77■□□□□ 0.12
LHX1P48742 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LHX1P48742 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms