Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CSNK1DP48730 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CSNK1DP48730 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CSNK1DP48730 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.93□□□□□ -0.02
CSNK1DP48730 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CSNK1DP48730 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.93□□□□□ -0.02
CSNK1DP48730 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.93□□□□□ -0.02
CSNK1DP48730 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.93□□□□□ -0.02
CSNK1DP48730 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CSNK1DP48730 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 AL023803.2-201ENST00000620080 638 ntBASIC14.93□□□□□ -0.02
CSNK1DP48730 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.93□□□□□ -0.02
CSNK1DP48730 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.93□□□□□ -0.02
CSNK1DP48730 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.93□□□□□ -0.02
CSNK1DP48730 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.93□□□□□ -0.02
CSNK1DP48730 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CSNK1DP48730 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CSNK1DP48730 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CSNK1DP48730 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CSNK1DP48730 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1DP48730 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.92□□□□□ -0.02
CSNK1DP48730 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CSNK1DP48730 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CSNK1DP48730 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 TUBB8P8-201ENST00000458717 1058 ntBASIC14.92□□□□□ -0.02
CSNK1DP48730 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 AC092658.1-201ENST00000505836 891 ntBASIC14.92□□□□□ -0.02
CSNK1DP48730 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.92□□□□□ -0.02
CSNK1DP48730 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.92□□□□□ -0.02
CSNK1DP48730 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.92□□□□□ -0.02
CSNK1DP48730 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.92□□□□□ -0.02
CSNK1DP48730 AC104982.3-201ENST00000581995 514 ntBASIC14.92□□□□□ -0.02
CSNK1DP48730 AC005695.3-201ENST00000614522 232 ntBASIC14.92□□□□□ -0.02
CSNK1DP48730 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.92□□□□□ -0.02
CSNK1DP48730 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.92□□□□□ -0.02
CSNK1DP48730 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 KHSRPP1-201ENST00000427983 1768 ntBASIC14.92□□□□□ -0.02
CSNK1DP48730 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1DP48730 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CSNK1DP48730 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1DP48730 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 AL390755.1-201ENST00000623716 2027 ntBASIC14.92□□□□□ -0.02
CSNK1DP48730 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.92□□□□□ -0.02
CSNK1DP48730 E2F3P2-201ENST00000447755 1422 ntBASIC14.92□□□□□ -0.02
CSNK1DP48730 AC009093.10-201ENST00000641956 1442 ntBASIC14.92□□□□□ -0.02
CSNK1DP48730 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CSNK1DP48730 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.91□□□□□ -0.02
CSNK1DP48730 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CSNK1DP48730 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1DP48730 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.91□□□□□ -0.02
CSNK1DP48730 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CSNK1DP48730 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1DP48730 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CSNK1DP48730 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms