Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CSNK1A1P48729 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.39□□□□□ -0.27
CSNK1A1P48729 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AC018529.2-202ENST00000611482 3087 ntBASIC13.38□□□□□ -0.27
CSNK1A1P48729 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AC007389.4-201ENST00000454674 793 ntBASIC13.38□□□□□ -0.27
CSNK1A1P48729 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 RN7SL837P-201ENST00000463010 287 ntBASIC13.38□□□□□ -0.27
CSNK1A1P48729 AC026434.2-201ENST00000506094 1078 ntBASIC13.38□□□□□ -0.27
CSNK1A1P48729 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AL390755.1-201ENST00000623716 2027 ntBASIC13.38□□□□□ -0.27
CSNK1A1P48729 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CSNK1A1P48729 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CSNK1A1P48729 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 AL355864.2-201ENST00000447420 863 ntBASIC13.37□□□□□ -0.27
CSNK1A1P48729 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.37□□□□□ -0.27
CSNK1A1P48729 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CSNK1A1P48729 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms