Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL645728.2-202ENST00000641679 227 ntBASIC16.07■□□□□ 0.16
SSR1P43307 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.07■□□□□ 0.16
SSR1P43307 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.07■□□□□ 0.16
SSR1P43307 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.07■□□□□ 0.16
SSR1P43307 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SSR1P43307 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSR1P43307 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SSR1P43307 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSR1P43307 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.07■□□□□ 0.16
SSR1P43307 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SSR1P43307 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SSR1P43307 AL390755.1-201ENST00000623716 2027 ntBASIC16.07■□□□□ 0.16
SSR1P43307 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SSR1P43307 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSR1P43307 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.07■□□□□ 0.16
SSR1P43307 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
SSR1P43307 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SSR1P43307 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SSR1P43307 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
SSR1P43307 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SSR1P43307 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
SSR1P43307 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
SSR1P43307 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.06■□□□□ 0.16
SSR1P43307 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.06■□□□□ 0.16
SSR1P43307 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SSR1P43307 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.06■□□□□ 0.16
SSR1P43307 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.06■□□□□ 0.16
SSR1P43307 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SSR1P43307 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.06■□□□□ 0.16
SSR1P43307 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.06■□□□□ 0.16
SSR1P43307 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.06■□□□□ 0.16
SSR1P43307 TPRX2P-201ENST00000535362 881 ntBASIC16.06■□□□□ 0.16
SSR1P43307 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.06■□□□□ 0.16
SSR1P43307 GPALPP1-207ENST00000611650 899 ntBASIC16.06■□□□□ 0.16
SSR1P43307 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.06■□□□□ 0.16
SSR1P43307 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
SSR1P43307 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SSR1P43307 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.06■□□□□ 0.16
SSR1P43307 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.06■□□□□ 0.16
SSR1P43307 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.06■□□□□ 0.16
SSR1P43307 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SSR1P43307 AC018529.2-202ENST00000611482 3087 ntBASIC16.05■□□□□ 0.16
SSR1P43307 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 AC010327.5-201ENST00000586923 3061 ntBASIC16.05■□□□□ 0.16
SSR1P43307 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 FAM86LP-201ENST00000478302 853 ntBASIC16.05■□□□□ 0.16
SSR1P43307 DOC2GP-202ENST00000514950 1163 ntBASIC16.05■□□□□ 0.16
SSR1P43307 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.05■□□□□ 0.16
SSR1P43307 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.05■□□□□ 0.16
SSR1P43307 AL390955.2-201ENST00000603032 514 ntBASIC16.05■□□□□ 0.16
SSR1P43307 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.05■□□□□ 0.16
SSR1P43307 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.05■□□□□ 0.16
SSR1P43307 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SSR1P43307 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.05■□□□□ 0.16
SSR1P43307 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
SSR1P43307 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SSR1P43307 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SSR1P43307 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.04■□□□□ 0.16
SSR1P43307 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SSR1P43307 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SSR1P43307 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SSR1P43307 AL157414.3-201ENST00000624276 1954 ntBASIC16.04■□□□□ 0.16
SSR1P43307 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms