Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 AP005117.1-202ENST00000581724 1908 ntBASIC18.22■□□□□ 0.51
PDE6BP35913 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.22■□□□□ 0.51
PDE6BP35913 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.22■□□□□ 0.51
PDE6BP35913 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC18.22■□□□□ 0.51
PDE6BP35913 RN7SL530P-201ENST00000485097 298 ntBASIC18.22■□□□□ 0.51
PDE6BP35913 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC18.22■□□□□ 0.51
PDE6BP35913 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PDE6BP35913 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 AL513477.1-201ENST00000602865 2407 ntBASIC18.22■□□□□ 0.51
PDE6BP35913 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PDE6BP35913 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PDE6BP35913 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.21■□□□□ 0.51
PDE6BP35913 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6BP35913 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6BP35913 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6BP35913 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6BP35913 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE6BP35913 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE6BP35913 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6BP35913 OR2R1P-201ENST00000441404 914 ntBASIC18.21■□□□□ 0.51
PDE6BP35913 AC004837.1-201ENST00000446267 564 ntBASIC18.21■□□□□ 0.51
PDE6BP35913 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE6BP35913 AC010234.1-201ENST00000494599 870 ntBASIC18.21■□□□□ 0.51
PDE6BP35913 ALG1L13P-202ENST00000519320 584 ntBASIC18.21■□□□□ 0.51
PDE6BP35913 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC18.21■□□□□ 0.51
PDE6BP35913 AC027237.1-201ENST00000560942 655 ntBASIC18.21■□□□□ 0.51
PDE6BP35913 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE6BP35913 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC18.21■□□□□ 0.51
PDE6BP35913 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.21■□□□□ 0.51
PDE6BP35913 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.21■□□□□ 0.51
PDE6BP35913 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PDE6BP35913 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PDE6BP35913 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.21■□□□□ 0.51
PDE6BP35913 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PDE6BP35913 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PDE6BP35913 AC008741.2-201ENST00000612792 3115 ntBASIC18.21■□□□□ 0.5
PDE6BP35913 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 PCDHB19P-201ENST00000570871 2371 ntBASIC18.2■□□□□ 0.5
PDE6BP35913 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 AC013726.1-201ENST00000563747 2285 ntBASIC18.2■□□□□ 0.5
PDE6BP35913 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDE6BP35913 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDE6BP35913 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.2■□□□□ 0.5
PDE6BP35913 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC18.2■□□□□ 0.5
PDE6BP35913 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.2■□□□□ 0.5
PDE6BP35913 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDE6BP35913 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.2■□□□□ 0.5
PDE6BP35913 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.2■□□□□ 0.5
PDE6BP35913 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDE6BP35913 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.2■□□□□ 0.5
PDE6BP35913 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms