Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNNA1P35221 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.89■□□□□ 0.13
CTNNA1P35221 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CTNNA1P35221 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.89■□□□□ 0.13
CTNNA1P35221 AL645937.2-201ENST00000396808 931 ntBASIC15.89■□□□□ 0.13
CTNNA1P35221 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.89■□□□□ 0.13
CTNNA1P35221 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.89■□□□□ 0.13
CTNNA1P35221 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.89■□□□□ 0.13
CTNNA1P35221 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.89■□□□□ 0.13
CTNNA1P35221 AC026410.3-201ENST00000514280 936 ntBASIC15.89■□□□□ 0.13
CTNNA1P35221 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.89■□□□□ 0.13
CTNNA1P35221 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNNA1P35221 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.89■□□□□ 0.13
CTNNA1P35221 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.89■□□□□ 0.13
CTNNA1P35221 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.89■□□□□ 0.13
CTNNA1P35221 AC107373.2-201ENST00000607735 490 ntBASIC15.89■□□□□ 0.13
CTNNA1P35221 AL691403.2-201ENST00000618460 490 ntBASIC15.89■□□□□ 0.13
CTNNA1P35221 AC004840.1-201ENST00000636359 365 ntBASIC15.89■□□□□ 0.13
CTNNA1P35221 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CTNNA1P35221 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CTNNA1P35221 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNNA1P35221 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CTNNA1P35221 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNNA1P35221 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.89■□□□□ 0.13
CTNNA1P35221 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.89■□□□□ 0.13
CTNNA1P35221 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.89■□□□□ 0.13
CTNNA1P35221 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CTNNA1P35221 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CTNNA1P35221 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CTNNA1P35221 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 AL359881.3-201ENST00000602640 1721 ntBASIC15.88■□□□□ 0.13
CTNNA1P35221 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CTNNA1P35221 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.88■□□□□ 0.13
CTNNA1P35221 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.88■□□□□ 0.13
CTNNA1P35221 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
CTNNA1P35221 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.88■□□□□ 0.13
CTNNA1P35221 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.88■□□□□ 0.13
CTNNA1P35221 AP001160.2-201ENST00000596071 487 ntBASIC15.88■□□□□ 0.13
CTNNA1P35221 AC008738.7-201ENST00000609744 511 ntBASIC15.88■□□□□ 0.13
CTNNA1P35221 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.88■□□□□ 0.13
CTNNA1P35221 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTNNA1P35221 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CTNNA1P35221 AL138799.1-201ENST00000448213 1675 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms