Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.47■□□□□ 0.23
CTGFP29279 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CTGFP29279 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.47■□□□□ 0.23
CTGFP29279 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 AL136172.1-201ENST00000598590 1394 ntBASIC16.47■□□□□ 0.23
CTGFP29279 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.47■□□□□ 0.23
CTGFP29279 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTGFP29279 MROH4P-201ENST00000431302 1578 ntBASIC16.47■□□□□ 0.23
CTGFP29279 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 RNF165-205ENST00000588679 2904 ntBASIC16.46■□□□□ 0.23
CTGFP29279 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.46■□□□□ 0.23
CTGFP29279 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.46■□□□□ 0.23
CTGFP29279 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CTGFP29279 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.46■□□□□ 0.23
CTGFP29279 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CTGFP29279 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.46■□□□□ 0.23
CTGFP29279 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CTGFP29279 ACTG1P19-201ENST00000418987 1116 ntBASIC16.46■□□□□ 0.23
CTGFP29279 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 RN7SL23P-201ENST00000484055 275 ntBASIC16.46■□□□□ 0.23
CTGFP29279 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CTGFP29279 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CTGFP29279 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.46■□□□□ 0.23
CTGFP29279 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.46■□□□□ 0.23
CTGFP29279 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.46■□□□□ 0.23
CTGFP29279 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.46■□□□□ 0.23
CTGFP29279 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.46■□□□□ 0.23
CTGFP29279 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CTGFP29279 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTGFP29279 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CTGFP29279 AC139712.1-201ENST00000378256 1875 ntBASIC16.46■□□□□ 0.22
CTGFP29279 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CTGFP29279 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTGFP29279 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTGFP29279 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 C18orf15-201ENST00000623680 2534 ntBASIC16.45■□□□□ 0.22
CTGFP29279 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 CICP23-201ENST00000605013 2741 ntBASIC16.45■□□□□ 0.22
CTGFP29279 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC16.45■□□□□ 0.22
CTGFP29279 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.45■□□□□ 0.22
CTGFP29279 CISD2-202ENST00000503643 808 ntTSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.45■□□□□ 0.22
CTGFP29279 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.45■□□□□ 0.22
CTGFP29279 GOLGA2P7-209ENST00000560408 745 ntBASIC16.45■□□□□ 0.22
CTGFP29279 MIR5001-201ENST00000580185 100 ntBASIC16.45■□□□□ 0.22
CTGFP29279 AP005212.2-201ENST00000584979 510 ntBASIC16.45■□□□□ 0.22
CTGFP29279 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.45■□□□□ 0.22
CTGFP29279 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTGFP29279 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTGFP29279 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTGFP29279 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTGFP29279 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTGFP29279 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTGFP29279 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CTGFP29279 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTGFP29279 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.45■□□□□ 0.22
CTGFP29279 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.45■□□□□ 0.22
CTGFP29279 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTGFP29279 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms