Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD53P19397 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
CD53P19397 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.71□□□□□ -0.22
CD53P19397 AC015802.1-201ENST00000588104 1449 ntBASIC13.71□□□□□ -0.22
CD53P19397 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.71□□□□□ -0.22
CD53P19397 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CD53P19397 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.71□□□□□ -0.22
CD53P19397 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CD53P19397 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD53P19397 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD53P19397 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.71□□□□□ -0.22
CD53P19397 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD53P19397 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 AP000845.1-201ENST00000581677 2131 ntBASIC13.7□□□□□ -0.22
CD53P19397 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.7□□□□□ -0.22
CD53P19397 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 AC012508.2-201ENST00000567613 1472 ntBASIC13.7□□□□□ -0.22
CD53P19397 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CD53P19397 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD53P19397 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.7□□□□□ -0.22
CD53P19397 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.7□□□□□ -0.22
CD53P19397 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.7□□□□□ -0.22
CD53P19397 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.7□□□□□ -0.22
CD53P19397 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.7□□□□□ -0.22
CD53P19397 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.7□□□□□ -0.22
CD53P19397 MIR4538-201ENST00000581377 78 ntBASIC13.7□□□□□ -0.22
CD53P19397 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 AC010319.3-201ENST00000597028 470 ntBASIC13.7□□□□□ -0.22
CD53P19397 AC084346.2-201ENST00000607097 949 ntBASIC13.7□□□□□ -0.22
CD53P19397 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CD53P19397 AL645728.2-202ENST00000641679 227 ntBASIC13.7□□□□□ -0.22
CD53P19397 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CD53P19397 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.7□□□□□ -0.22
CD53P19397 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD53P19397 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CD53P19397 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.69□□□□□ -0.22
CD53P19397 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 AC018442.1-201ENST00000421439 2061 ntBASIC13.69□□□□□ -0.22
CD53P19397 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.69□□□□□ -0.22
CD53P19397 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD53P19397 ACTBP11-201ENST00000436287 1126 ntBASIC13.69□□□□□ -0.22
CD53P19397 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.69□□□□□ -0.22
CD53P19397 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.69□□□□□ -0.22
CD53P19397 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms