Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
VCLP18206 TDH-203ENST00000531764 1110 ntBASIC15.16■□□□□ 0.02
VCLP18206 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.16■□□□□ 0.02
VCLP18206 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.16■□□□□ 0.02
VCLP18206 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.16■□□□□ 0.02
VCLP18206 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.16■□□□□ 0.02
VCLP18206 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VCLP18206 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
VCLP18206 IGHV3-72-202ENST00000621503 303 ntBASIC15.16■□□□□ 0.02
VCLP18206 BX539320.1-201ENST00000623759 877 ntBASIC15.16■□□□□ 0.02
VCLP18206 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.16■□□□□ 0.02
VCLP18206 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VCLP18206 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.16■□□□□ 0.02
VCLP18206 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.16■□□□□ 0.02
VCLP18206 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.16■□□□□ 0.02
VCLP18206 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.16■□□□□ 0.02
VCLP18206 LINC01230-201ENST00000625222 3017 ntBASIC15.16■□□□□ 0.02
VCLP18206 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.16■□□□□ 0.02
VCLP18206 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
VCLP18206 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
VCLP18206 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
VCLP18206 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VCLP18206 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
VCLP18206 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.15■□□□□ 0.02
VCLP18206 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.15■□□□□ 0.02
VCLP18206 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
VCLP18206 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.15■□□□□ 0.02
VCLP18206 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
VCLP18206 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
VCLP18206 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.15■□□□□ 0.02
VCLP18206 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.15■□□□□ 0.02
VCLP18206 AP001582.1-201ENST00000525856 295 ntBASIC15.15■□□□□ 0.02
VCLP18206 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
VCLP18206 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.15■□□□□ 0.02
VCLP18206 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.15■□□□□ 0.02
VCLP18206 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.15■□□□□ 0.02
VCLP18206 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.15■□□□□ 0.02
VCLP18206 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.15■□□□□ 0.02
VCLP18206 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.15■□□□□ 0.02
VCLP18206 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.15■□□□□ 0.02
VCLP18206 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.15■□□□□ 0.02
VCLP18206 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.15■□□□□ 0.02
VCLP18206 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VCLP18206 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VCLP18206 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
VCLP18206 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
VCLP18206 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.14■□□□□ 0.01
VCLP18206 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
VCLP18206 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VCLP18206 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VCLP18206 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 ZBED1P1-201ENST00000502364 1930 ntBASIC15.14■□□□□ 0.01
VCLP18206 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
VCLP18206 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VCLP18206 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 ACKR1-201ENST00000368121 1240 ntBASIC15.14■□□□□ 0.01
VCLP18206 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
VCLP18206 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
VCLP18206 KRT43P-201ENST00000434019 910 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms