Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 FDX1P1-201ENST00000449115 551 ntBASIC14.23□□□□□ -0.13
NCK1P16333 SERBP1P3-201ENST00000459980 809 ntBASIC14.23□□□□□ -0.13
NCK1P16333 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.23□□□□□ -0.13
NCK1P16333 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.23□□□□□ -0.13
NCK1P16333 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.23□□□□□ -0.13
NCK1P16333 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.23□□□□□ -0.13
NCK1P16333 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 AL513210.1-201ENST00000629608 234 ntBASIC14.23□□□□□ -0.13
NCK1P16333 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 AC099521.3-201ENST00000624251 2938 ntBASIC14.23□□□□□ -0.13
NCK1P16333 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NCK1P16333 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.23□□□□□ -0.13
NCK1P16333 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NCK1P16333 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NCK1P16333 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.22□□□□□ -0.13
NCK1P16333 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NCK1P16333 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.22□□□□□ -0.13
NCK1P16333 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.22□□□□□ -0.13
NCK1P16333 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NCK1P16333 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.22□□□□□ -0.13
NCK1P16333 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.22□□□□□ -0.13
NCK1P16333 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NCK1P16333 RPL37AP1-201ENST00000412502 279 ntBASIC14.22□□□□□ -0.13
NCK1P16333 PGAM5P1-201ENST00000518923 814 ntBASIC14.22□□□□□ -0.13
NCK1P16333 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.22□□□□□ -0.13
NCK1P16333 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 AC090505.1-201ENST00000430515 1834 ntBASIC14.22□□□□□ -0.13
NCK1P16333 DGCR9-201ENST00000609630 2415 ntBASIC14.22□□□□□ -0.13
NCK1P16333 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.22□□□□□ -0.13
NCK1P16333 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NCK1P16333 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NCK1P16333 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.22□□□□□ -0.13
NCK1P16333 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NCK1P16333 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NCK1P16333 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.21□□□□□ -0.13
NCK1P16333 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.21□□□□□ -0.13
NCK1P16333 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
NCK1P16333 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
NCK1P16333 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NCK1P16333 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.21□□□□□ -0.13
NCK1P16333 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.21□□□□□ -0.13
NCK1P16333 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.21□□□□□ -0.13
NCK1P16333 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.21□□□□□ -0.13
NCK1P16333 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NCK1P16333 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.21□□□□□ -0.13
NCK1P16333 MTDHP5-201ENST00000598980 586 ntBASIC14.21□□□□□ -0.13
NCK1P16333 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.21□□□□□ -0.13
NCK1P16333 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NCK1P16333 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.21□□□□□ -0.13
NCK1P16333 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.21□□□□□ -0.13
NCK1P16333 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NCK1P16333 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NCK1P16333 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NCK1P16333 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NCK1P16333 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
NCK1P16333 INE2-201ENST00000630399 1874 ntBASIC14.21□□□□□ -0.14
NCK1P16333 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NCK1P16333 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms