Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF40O75150 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF40O75150 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF40O75150 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF40O75150 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF40O75150 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF40O75150 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF40O75150 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF40O75150 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF40O75150 CICP8-201ENST00000455800 2813 ntBASIC16.31■□□□□ 0.2
RNF40O75150 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF40O75150 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF40O75150 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RNF40O75150 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF40O75150 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF40O75150 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RNF40O75150 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF40O75150 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF40O75150 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
RNF40O75150 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF40O75150 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.3■□□□□ 0.2
RNF40O75150 CROCCP4-201ENST00000457096 498 ntBASIC16.3■□□□□ 0.2
RNF40O75150 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF40O75150 AC092658.1-201ENST00000505836 891 ntBASIC16.3■□□□□ 0.2
RNF40O75150 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RNF40O75150 AP005482.1-201ENST00000563722 1273 ntBASIC16.3■□□□□ 0.2
RNF40O75150 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF40O75150 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF40O75150 AC015936.2-201ENST00000593177 259 ntBASIC16.3■□□□□ 0.2
RNF40O75150 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF40O75150 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
RNF40O75150 AC010319.3-201ENST00000597028 470 ntBASIC16.3■□□□□ 0.2
RNF40O75150 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.3■□□□□ 0.2
RNF40O75150 AL033527.4-201ENST00000641026 673 ntBASIC16.3■□□□□ 0.2
RNF40O75150 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 AC127383.1-201ENST00000444697 1800 ntBASIC16.3■□□□□ 0.2
RNF40O75150 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.3■□□□□ 0.2
RNF40O75150 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.3■□□□□ 0.2
RNF40O75150 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RNF40O75150 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
RNF40O75150 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF40O75150 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF40O75150 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF40O75150 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RNF40O75150 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.29■□□□□ 0.2
RNF40O75150 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF40O75150 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF40O75150 AC245100.5-201ENST00000452108 331 ntBASIC16.29■□□□□ 0.2
RNF40O75150 AC092552.1-201ENST00000547243 906 ntBASIC16.29■□□□□ 0.2
RNF40O75150 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF40O75150 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.29■□□□□ 0.2
RNF40O75150 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF40O75150 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.29■□□□□ 0.2
RNF40O75150 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF40O75150 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.29■□□□□ 0.2
RNF40O75150 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RNF40O75150 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RNF40O75150 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms