Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC10.32□□□□□ -0.76
NDUFA1O15239 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.32□□□□□ -0.76
NDUFA1O15239 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC10.32□□□□□ -0.76
NDUFA1O15239 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 POLD2P1-201ENST00000511220 997 ntBASIC10.32□□□□□ -0.76
NDUFA1O15239 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
NDUFA1O15239 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.32□□□□□ -0.76
NDUFA1O15239 AC022145.2-201ENST00000598203 171 ntBASIC10.32□□□□□ -0.76
NDUFA1O15239 AL121894.2-201ENST00000602977 491 ntBASIC10.32□□□□□ -0.76
NDUFA1O15239 AL645728.2-202ENST00000641679 227 ntBASIC10.32□□□□□ -0.76
NDUFA1O15239 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
NDUFA1O15239 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
NDUFA1O15239 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 AC130686.1-201ENST00000622936 2466 ntBASIC10.31□□□□□ -0.76
NDUFA1O15239 AC099521.3-201ENST00000624251 2938 ntBASIC10.31□□□□□ -0.76
NDUFA1O15239 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 AC105206.1-202ENST00000314927 2368 ntBASIC10.31□□□□□ -0.76
NDUFA1O15239 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
NDUFA1O15239 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.31□□□□□ -0.76
NDUFA1O15239 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
NDUFA1O15239 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 MTND6P24-201ENST00000440466 518 ntBASIC10.31□□□□□ -0.76
NDUFA1O15239 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.31□□□□□ -0.76
NDUFA1O15239 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 SERBP1P3-201ENST00000459980 809 ntBASIC10.31□□□□□ -0.76
NDUFA1O15239 ALG1L5P-201ENST00000482043 771 ntBASIC10.31□□□□□ -0.76
NDUFA1O15239 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
NDUFA1O15239 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.31□□□□□ -0.76
NDUFA1O15239 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC10.31□□□□□ -0.76
NDUFA1O15239 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.31□□□□□ -0.76
NDUFA1O15239 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.31□□□□□ -0.76
NDUFA1O15239 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms