Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRIM38O00635 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM38O00635 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM38O00635 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
TRIM38O00635 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TRIM38O00635 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM38O00635 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM38O00635 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM38O00635 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM38O00635 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
TRIM38O00635 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.15■□□□□ 0.02
TRIM38O00635 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM38O00635 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 SBF1P1-201ENST00000444527 5631 ntBASIC15.15■□□□□ 0.02
TRIM38O00635 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM38O00635 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.15■□□□□ 0.02
TRIM38O00635 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRIM38O00635 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRIM38O00635 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
TRIM38O00635 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM38O00635 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.15■□□□□ 0.02
TRIM38O00635 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM38O00635 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
TRIM38O00635 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 MIR1247-201ENST00000408206 136 ntBASIC15.14■□□□□ 0.01
TRIM38O00635 GPAA1P2-201ENST00000417923 928 ntBASIC15.14■□□□□ 0.01
TRIM38O00635 FAM197Y7-201ENST00000432892 766 ntBASIC15.14■□□□□ 0.01
TRIM38O00635 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM38O00635 GAPDHP40-201ENST00000505218 1006 ntBASIC15.14■□□□□ 0.01
TRIM38O00635 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 AC023310.1-201ENST00000554836 735 ntBASIC15.14■□□□□ 0.01
TRIM38O00635 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM38O00635 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.14■□□□□ 0.01
TRIM38O00635 MIR4313-201ENST00000580760 101 ntBASIC15.14■□□□□ 0.01
TRIM38O00635 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.14■□□□□ 0.01
TRIM38O00635 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.14■□□□□ 0.01
TRIM38O00635 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRIM38O00635 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms