Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHL1O00533 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.03■□□□□ 0.64
CHL1O00533 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.03■□□□□ 0.64
CHL1O00533 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.03■□□□□ 0.64
CHL1O00533 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.03■□□□□ 0.64
CHL1O00533 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.03■□□□□ 0.64
CHL1O00533 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 AC006122.1-201ENST00000493323 440 ntBASIC19.03■□□□□ 0.64
CHL1O00533 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC19.03■□□□□ 0.64
CHL1O00533 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC19.03■□□□□ 0.64
CHL1O00533 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHL1O00533 AL132994.2-201ENST00000603120 687 ntBASIC19.03■□□□□ 0.64
CHL1O00533 AC138649.2-201ENST00000615886 705 ntBASIC19.03■□□□□ 0.64
CHL1O00533 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 AL133338.1-201ENST00000565695 1517 ntBASIC19.03■□□□□ 0.64
CHL1O00533 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CHL1O00533 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.03■□□□□ 0.64
CHL1O00533 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CHL1O00533 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHL1O00533 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHL1O00533 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.03■□□□□ 0.64
CHL1O00533 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC19.03■□□□□ 0.64
CHL1O00533 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CHL1O00533 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 AGGF1P1-201ENST00000509500 2073 ntBASIC19.02■□□□□ 0.64
CHL1O00533 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.02■□□□□ 0.64
CHL1O00533 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CHL1O00533 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CHL1O00533 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.02■□□□□ 0.64
CHL1O00533 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.02■□□□□ 0.64
CHL1O00533 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.02■□□□□ 0.64
CHL1O00533 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.02■□□□□ 0.64
CHL1O00533 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.02■□□□□ 0.64
CHL1O00533 AC009779.1-201ENST00000551138 283 ntBASIC19.02■□□□□ 0.64
CHL1O00533 ACTG1P17-201ENST00000558391 1119 ntBASIC19.02■□□□□ 0.64
CHL1O00533 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.02■□□□□ 0.64
CHL1O00533 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 AC008805.1-201ENST00000590892 364 ntBASIC19.02■□□□□ 0.64
CHL1O00533 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.02■□□□□ 0.64
CHL1O00533 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.02■□□□□ 0.64
CHL1O00533 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.02■□□□□ 0.64
CHL1O00533 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.64
CHL1O00533 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHL1O00533 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHL1O00533 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHL1O00533 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHL1O00533 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
CHL1O00533 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHL1O00533 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
CHL1O00533 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC19.01■□□□□ 0.63
CHL1O00533 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CHL1O00533 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.01■□□□□ 0.63
CHL1O00533 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 EIF4HP1-201ENST00000453115 687 ntBASIC19.01■□□□□ 0.63
CHL1O00533 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.01■□□□□ 0.63
CHL1O00533 AC106794.1-201ENST00000506935 792 ntBASIC19.01■□□□□ 0.63
CHL1O00533 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC19.01■□□□□ 0.63
CHL1O00533 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.01■□□□□ 0.63
CHL1O00533 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.01■□□□□ 0.63
CHL1O00533 PAM16-211ENST00000575848 518 ntTSL 3 BASIC19.01■□□□□ 0.63
CHL1O00533 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHL1O00533 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHL1O00533 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.01■□□□□ 0.63
CHL1O00533 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC19.01■□□□□ 0.63
CHL1O00533 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC19.01■□□□□ 0.63
CHL1O00533 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms