Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AC008132.1-202ENST00000342005 1389 ntBASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AC012618.1-201ENST00000461223 412 ntBASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 RN7SL190P-201ENST00000582519 257 ntBASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 AC132192.2-201ENST00000596206 1147 ntBASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TBC1D3BA6NDS4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 MROH4P-201ENST00000431302 1578 ntBASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 KRT8P19-201ENST00000551916 1455 ntBASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 ACTG1P2-201ENST00000415776 1125 ntBASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 ACTG1P11-201ENST00000425411 1125 ntBASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AC125604.1-201ENST00000496255 707 ntBASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AC024681.1-201ENST00000521917 487 ntBASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AC009884.2-201ENST00000603110 324 ntBASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AC244394.1-201ENST00000435000 1665 ntBASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 AL008718.2-201ENST00000609206 1313 ntBASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.15■□□□□ 0.02
TBC1D3BA6NDS4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
TBC1D3BA6NDS4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3BA6NDS4 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms