Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 AC003686.1-201ENST00000550956 1034 ntBASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 NAT9-211ENST00000580632 799 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 AC006453.1-201ENST00000636037 1257 ntBASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 AHCYP4-201ENST00000419201 1315 ntBASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC144AA2RUR9 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 FRMPD2B-201ENST00000431305 1347 ntBASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 LDHBP1-201ENST00000455730 1119 ntBASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 U62317.3-201ENST00000608319 855 ntBASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 UFM1-202ENST00000379649 846 ntTSL 4 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC144AA2RUR9 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC144AA2RUR9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 STK26-204ENST00000481105 1835 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 MPV17-204ENST00000399052 749 ntTSL 4 BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 MIR3188-201ENST00000583494 85 ntBASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 AL109837.1-201ENST00000603272 613 ntBASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC144AA2RUR9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC144AA2RUR9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms